Session 2: Introducing new technologies and networks
Schedule: 10:45 am – 12:00 pm EEST (75 min)
Organizers: Camilo Guzman, Stefan Terjung and Nadia Halidi
Chair: Nadia Halidi, Advanced Light Microscopy Unit (ALMU), Centre for Genomic Regulation
Section 1 – Implementing new technologies in core facilities 10.45 – 11.35
Integrating microfluidics and imaging:
- How to implement seqFISH (Multiplexing) in a core facility? Kai Schleicher, Imaging Core Facility (IMCF), Biozentrum, University of Basel (10:45 – 10:55) (Virtual)
- CODEX in the core: the chemistry between chemistry, imaging and analysis, Saskia Lippens, VIB BioImaging Core Ghent (10:55 – 11:05) (Virtual)
Spatial omics and imaging:
- Spatial transcriptomics in a core facility, Anjalie Schlaeppi, BioImaging and Optics Platform (BIOP) and Histology core facility, EPFL (11:05 – 11:15)
- Challenges of multiplex spatial phenotyping/transcriptomics within an imaging core, Peter O’Toole, University of York (11:15 – 11:25)
Discussion (11.25 – 11.35)
Section 2 – Introducing new networks 11.35 – 12.00
- Oxford Bioimaging Network, Christoffer Lagerholm, Oxford-Zeiss Centre of Excellence, Kennedy Institute of Rheumatology, University of Oxford (11:35 – 11:45)
- African BioImaging Consortium: Building the African Microscopy Community, Caron Jacobs, IDM Microscopy Unit, Wellcome-CIDRI Africa & the Institute for Infectious Disease & Molecular Medicine, University of Cape Town (11:45 – 11:55)
Discussion (11:55 – 12:00)
Sponsored by Luxendo, Bruker
Opening words by Guillaume Jacquemet and Pasi Kankaanpää
Sponsor talk – CoolLED
by Jo Whetstone
Johanna Perens, “Multimodal mouse brain atlas with a stereotaxic coordinate system for bridging in vivo and ex vivo 3D imaging techniques”
Hana Valenta, “Separation of spectrally overlapping fluorophores using intra-exposure excitation modulation”